Zucchini Rotting at The Ends: Treating Blossom-End Rot in Zucchini

There’s nothing worse than harvesting full-grown zucchini, only to find they have rotting ends! Blossom-end rot strikes ripening zucchini before you pick them. Learn to treat and prevent this condition alongside seasoned vegetable grower Jerad Bryant.

A close-up of a woman's hand showing a rotting zucchini with light green thin skin and a rotting brown tip.

Contents

Blossom-end rot affects a surprising amount of crops! Tomatoes, peppers, eggplants, squash, and zucchini are susceptible. Zucchini is particularly troublesome because the rot can spread from the butt up, ruining entire harvests.

The good news is this condition is easy to prevent and treat. We’ll ensure your plants avoid future rotting by looking at their cultural conditions. Fix the issues, and the rot goes away.

These guidelines also work well for other crops that experience blossom-end rot. It affects them similarly—look for ripe fruits with rotting ends. They’ll have mushy brown or black spots when you grasp them.

What Is Blossom-End Rot?

The plant features thick, finely hairy stems with young, oblong, bright yellow fruit affected by blossom end rot.
Proper nutrients and steady moisture prevent mid-season fruit issues.

It’s not a disease, but a cultural condition. It looks like a bacteria or virus spreading from fruit to fruit but it’s a symptom of crops struggling to get their proper nutrients. Water, pH levels, fertilizer, temperature, and airflow are all factors that can cause it. 

This rot typically shows up halfway through your growing season, as zucchini vines start to produce excessively. The vines need lots of steady moisture and nutrients, and when they don’t get this they can’t ripen their fruits. 

How to Identify Blossom-End Rot

Close-up of an oblong fruit with greenish-yellow skin, affected by brown, rotten spots.
Mushy lesions and yellowing indicate poor pollination problems.

It’s easy to mistake rot on the blossom’s end for zucchini rot from inadequate pollination. Zucchini is monoecious, meaning it has separate male and female flowers on the same plant. If your zucchini rots before forming, and has a slight bulbous swelling near its stem, it’s most likely a pollination problem. 

Blossom-end rot differs from pollination rot in the way it spreads. Whereas pollination rot happens quickly after the flowers fade, rot on the blossom’s end takes longer to show. Look for large fruits that partially ripen and bulge before rotting at the end. These zucchinis look ripe, but their bottoms are uneatable, mushy, and black or yellow.

Look out for these other common symptoms when identifying this condition in zucchinis:

  • Mushy lesions on the butt of ripening zucchini
  • Premature yellowing at the blossom’s end
  • Shrinking black-brown skin
  • Premature zucchini decay

How Does Blossom-End Rot Occur? 

Close-up of a pale green oblong fruit affected by blossom end rot showing a soft brown rotten tip.
Ensure proper conditions to help plants absorb calcium.

This condition isn’t always because of a calcium deficiency—it often happens when plants can’t take in calcium. Where soils are too acidic, dry, or cold, zucchini roots struggle to consume it. Fix the conditions, and the roots can access available calcium. 

When your crops get all they need and still have this condition, it’s most likely because of nutrient deficiencies. First, solve the cultural issues—if rot doesn’t go away, consider adding calcium-rich amendments that will boost the nutrient content in the soil over time.

These physiological settings cause problems when they’re out of whack—bring these factors back to baseline and your zucchini crops will ripen their fruits properly.

Watering Infrequency

Splashes of water pour onto young plants with large, jagged, dark green leaves featuring silvery spots, growing in a wooden raised bed.
Consistent watering helps crops absorb micronutrients effectively.

Calcium and water availability have deep connections—when there’s too much or too little water, zucchini roots can’t suck up nutrients. Watering infrequency causes this, as the calcium in the soil can’t move from the particles to plant roots.

Shallow, infrequent watering also causes blossom-end rot. When plants suck up water, calcium comes with it. The roots can’t take in any calcium without enough moisture. Watch for heat waves or droughts, watering your crops plenty so they’re resilient. 

One easy method to ensure your vines have consistent moisture is by turning on a watering system with a timer. Do you not own a watering system? Simply set a timer on your phone to check on your zucchini three times a week. Dig your finger into the bed to see if it’s wet, and water well if it’s dry on the top two inches. Hold off on watering already moist ground.

pH Imbalance

Close-up of a gardener in yellow rubber boots measuring the pH level of the soil in a bed of growing plants.
Maintain a neutral pH for optimal absorption and fruit health.

Zucchini, like tomatoes and peppers, appreciates a neutral pH between 6.0 and 7.5. Acidic or extremely alkaline pH lowers Ca availability, making it impossible for your vines to form fully ripe fruits. They’ll swell and turn color, but rot on their butts in the last stages of ripening. You’ll want to amend your beds so its pH is around 7.0. 

Extreme Temperatures

The plant has thick, juicy dark green stems and elongated bright yellow fruits, some of which have rotting tips.
Ensure stable temperatures for better nutrient absorption.

Cold soils cause calcium deficiencies, which lead to zucchini end rots. This commonly occurs early or late during the growing season. Lingering spring frosts and early fall freeze shock zucchini plant roots. 

This also happens during excessive heat waves in dry beds. The hot temperatures affect water availability, which affects nutrient transfer and absorption. Keep plants cool during heat waves with shade cloth—maintain warmth during frosts with greenhouse plastic or row covers.

Low Calcium

Close-up of a gardener's hand adding fresh, loose soil to a glass test tube.
Test for Ca and amend as needed.

If your plants have consistent moisture, good airflow, proper pH, and mild temperatures and still experience blossom-end rot, then it’s most likely a calcium deficiency. Calcium (Ca) helps this vegetable form ripe, dark green fruits. The mineral helps cells stay stuck together, creating tight, thick skin. When deficient, plants can’t ripen the skin and flesh properly. They rot it instead, turning fruits black, brown, or yellow.

A surefire way to know if your zucchini has Ca deficiencies is by getting a soil test. If the test comes back with low Ca levels, apply a fertilizer or amendment that has plenty of it. While there aren’t immediate sources of calcium for crops, prepping the ground ahead of the growing season helps.

Excessive Nitrogen

Close-up of a gardener in a denim shirt holding pink granular plant fertilizer.
Too much nitrogen can hinder micronutrient uptake.

Minerals affect each other underneath the dirt. Too much nitrogen makes it nearly impossible for plants to take in micronutrients, which leads to zucchini rot. Avoid using nitrogen-rich fertilizer, and go for a well-balanced organic type meant for vegetables.

Prevention

Zucchini with this rot won’t fix itself right away—you’ll have to wait for more ripening fruits to see the condition disappear. Keep future rot away with these prevention techniques. 

Water Consistently

Close-up of a young zucchini plant possessing sprawling vines that are adorned with broad, serrated leaves in a bed with a black drip irrigation hose.
Water deeply and less frequently for strong, drought-resistant roots.

Ensure zucchini roots have a happy home with consistent moisture. Use a timer, or check your garden daily to see when the dirt is dry. Water as often as you need so the soil is moist but not soggy. I like to let the top inch or two dry before a deep soaking. 

Water deeply and infrequently rather than often and shallowly. Shallow waterings encourage short roots that are less resilient to drought. Deep waterings encourage them to reach further into the ground, creating strong plants with fewer blossom-end rot cases. Roots have better access to nutrients at a deeper level too.

Finally, avoid overhead watering as it causes powdery and downy mildew. Water plants near their base, and you’ll get their roots wet without touching the leaves. 

Balance Your Soil’s pH

Close-up of a gardener's hand holding crushed egg shells against a blurred background of a wicker bowl filled with eggshells.
Maintain neutral pH for optimal nutrient absorption in plants.

Acidic or extremely alkaline soils make it impossible for roots to intake nutrients. Most vegetables prefer a somewhat neutral pH, and zucchini is no different. Use a soil test to determine pH levels, then add amendments to keep them between 6.0 and 7.5

If your soil’s pH is too high, add garden sulfur to lower it. Raise acidic levels quickly by adding calcium carbonate or crushed eggshells. Crushed eggshells are perfect for treating this condition because they raise pH and are rich in calcium. However, they aren’t available to plants until they’ve broken down, and are best used ahead of the season as a preparation. 

All amendments take weeks to months to take effect—adjust your beds this year for a better crop next year. Add compost or organic matter to your garden this season—it helps your vines despite the pH level.

Protect Weak Plants

A field with rows of growing plants, some covered with row cover and others with plastic mulch.
Use shade cloth and covers to protect plants from extreme temperatures.

Your plants benefit from extra protection during intense heat waves or fall freezes. Use shade cloth, a greenhouse product, to give ripening zucchini shade during the hottest days of summer. Temperatures above 100°F (38°C) are excessive, and your plants need extra shade and water. Other shade structures, like sun umbrellas, work well too—just be sure to give your plants some space from any materials with posts or canopies.

Early spring and autumn seasons surprise ripening fruits with nighttime freezes. Where this type of frost is common, use a row cover or UV-resistant greenhouse plastic to cover the plants. Drape the materials over posts to keep them off the plants.

Add Compost or Organic Mulch

This plant has broad, spiky, green leaves with white speckles and yields cylindrical green fruits that grow along thick, hairy stems with straw-mulched soil.
Compost enriches dirt, improves drainage, and balances pH levels.

A good dressing of compost injects organic goodness into your garden. It not only adds beneficial nutrients that bolster growing vines—but it also makes the soil more acidic with time. It’s really useful for alkaline dirt that needs amending.

Even when the pH is out of whack, compost helps plants survive. Microorganisms work to decay nutrients and make them more available to plant roots. Extra air pockets in this amendment allow roots to breathe despite clay or sandy texture. Compost has high porosity, meaning it can absorb moisture and hold it for plant roots.

When in doubt, add some compost. It’ll create humus-rich pockets of nutrition that vining plants reach into when they need it most. Use it or a similar amendment like leaf mold, straw, or grass clippings with dried leaves.

Treatment

This plant's sprawling vines are adorned with broad, serrated leaves and produce vibrant green, ribbed fruits.
Address nutrient issues to prevent rot in future vegetables.

Blossom-end rot doesn’t disappear from zucchini that already have it. Once they struggle to form cell walls and start rotting, this condition spreads from the bottom up. You’ll want to address the physiological issues first, then watch for new vegetables to form without rot. If they continue ripening and rotting, they need something they’re not getting, whether it’s water, calcium, or a proper pH level.

You don’t have to waste those rotting vegetables though! This condition is easy to mitigate in its early stages. Cut off the mushy ends and cook the rest of the zucchini how you like best. 

Some treatments help this condition stop spreading. This means the rot remains on zucchini butts, but it won’t grow any bigger. Use these treatment techniques to stop this condition in its tracks. Combine them with prevention methods and you won’t see this issue again.

Apply Amendments

Close-up of wide, deeply lobed leaves with a rough texture, sprinkled with gray ash used as fertilizer.
Use fast-acting sprays for immediate nutrient relief.

Calcium feeds deliver nutrients to plants in dire straights. These ensure plants stop rotting while slower-acting ones maintain nutritional balance in the long run. A good rule of thumb is adding slow-acting organic amendments at planting. Bring out the faster-acting sprays, liquids, and foliar feeds if this rot is already occurring. 

These are excellent slow-acting calcium amendments to add to planting holes during early spring:

  • Bone meal
  • Wood ash
  • Gypsum
  • Rock phosphate (also adds phosphorous)

For quick fixes, apply a foliar feed. You’ll still need to address the root causes of this condition. Apply foliar feeds as a part of multiple techniques to mitigate rotting. 

Leach Nitrogen Out Of Your Soil

A stream of water pours down on oblong, bright yellow fruits growing on thick, sturdy stems among broad, lobed leaves.
Remove excess nitrogen by watering beds until saturated.

If a soil test tells you your soil has too much nitrogen, you’ll want to leach it out as quickly as possible. Excess nitrogen holds calcium hostage, making less of it available for your vines. Rather than starting over with new soil, water your beds for a long time to get nitrogen flowing

Do this by turning on a hose with low water pressure so it trickles slowly. Set the nozzle on your garden beds, and leave it until the moisture saturates the area. You’ll need to wait an hour or more for the water to seep enough nitrogen out of the dirt. Move the nozzle as you see fit to leach it out throughout your beds. 

One leaching session should be enough. Know for sure by taking another soil test a week later. If nitrogen levels are still higher than normal, set your hose to low and soak it out of your beds as many times as necessary. Note that other nutrients will leach out too, and your soil may need additional amending after this process. 

Wait It Out

A close-up of a gardener's hand in a red and white glove holding a freshly picked, dark green, oblong, glossy fruit.
Prepare for the next round of fruit to ripen properly.

Oftentimes, the first round of fruit displays this rot while the next round ripens correctly. Waiting it out may be all that’s necessary for this condition to vanish. If your garden meets all proper guidelines, wait for the second round of zucchini. Harvest your first round of rotting vegetables, cutting off any mushy parts before eating them. 

Key Takeaways

  • Blossom-end rot is not always due to a calcium deficiency. First check soil moisture, pH, and nutrient levels before adding amendments. 
  • Prevent future rot with slow-acting amendments like bone meal, eggshells, and wood ash.
  • Add compost! Compost helps plants resist pests, diseases, and nutrient deficiencies. Mix it before planting, and add it to the top of your beds throughout the growing season.
SHARE THIS POST
A grape plant with fruits at the back, showing leaves turning yellow with green veins, as signs of lacking minerals and nutrients.

Fertilizer

What Is Chlorosis? Treating Iron Deficiency in Plants

If your plants have yellow leaves with green veins, they’re likely suffering from chlorosis. Although there are numerous causes of this issue, iron deficiency is one of the most common. Farmer Briana Yablonski will further explain this issue and provide ways to fix it.

A vibrant green plant with fruit developing watermelon problems that is not visible upfront

Fruits

9 Watermelon-Growing Problems To Avoid This Summer

Growing watermelons is a labor of love, or at least patience. Now is the time to savor the sweet rewards and indulge in the taste of summer. Avoiding common growing problems is essential to getting full, healthy fruits. Learn how to streamline successful production with gardening expert Katherine Rowe

An elevated planter in a garden with a variety of vegetables, with flowering plants outside of the box.

Raised Bed Gardening

11 Tips to Increase Production in Your Raised Bed Garden

Gardening in raised beds is an increasing trend for growers who want more control over soil health and bend over less when harvesting and pruning. But how do we increase our yields while still enjoying our time in the garden? Join organic farmer Jenna Rich for 11 tips to maximize production in your raised bed garden.